About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21741CALCIUM BINDING PROTEIN
Ama21742CALCIUM BINDING PROTEIN
Ama21743
Ama21744EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama21745ATP-DEPENDENT DNA HELICASE
Ama21746PR DOMAIN ZINC FINGER PROTEIN
Ama21747CT120 PROTEIN
Ama21748UNCHARACTERIZED
Ama21749INWARD RECTIFIER POTASSIUM CHANNEL
Ama21750INWARD RECTIFIER POTASSIUM CHANNEL
Ama21752CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21753ANTIGEN 332, DBL-LIKE PROTEIN-RELATED
Ama21756SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Ama21757TRANSPOSABLE ELEMENT-RELATED
Ama21758
Ama21759
Ama21760
Ama21761
Ama21762THREE PRIME REPAIR EXONUCLEASE 1, 2
Ama21763PERFORIN-LIKE PROTEIN 1
Ama21764
Ama21766L1 TRANSPOSABLE ELEMENT-RELATED
Ama21767MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Ama21768MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Ama21769CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21771
Ama21772EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama21773CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21774
Ama21775EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama21776THAP DOMAIN PROTEIN
Ama21777MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
Ama21778
Ama21780DNA-DIRECTED RNA POLYMERASE I,II,III
Ama21781HELICASE SRCAP-RELATED
Ama21783STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2
Ama21784ALPHA-PROTEIN KINASE VWKA
Ama21785SLR5058 PROTEIN
Ama21786GEO07735P1-RELATED-RELATED
Ama21787PROTEIN LIN1
Ama21788MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22
Ama21789ALPHA-PROTEIN KINASE VWKA
Ama21790ALPHA-PROTEIN KINASE VWKA
Ama21791ANKYRIN REPEAT-CONTAINING
Ama21792SLR5058 PROTEIN
Ama21793ALPHA-PROTEIN KINASE VWKA
Ama21794POTE ANKYRIN DOMAIN
Ama21795POTE ANKYRIN DOMAIN
Ama21796
Ama21798FIBROSIN FAMILY MEMBER
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