The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama22441 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama22443 | F20B24.22 |
Ama22444 | |
Ama22445 | SET AND MYND DOMAIN-CONTAINING PROTEIN 4 |
Ama22446 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama22448 | |
Ama22450 | NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED |
Ama22451 | BETA-LACTAMASE-RELATED |
Ama22452 | |
Ama22456 | CHROMOSOME 28 C12ORF29 HOMOLOG |
Ama22457 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama22461 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama22462 | |
Ama22463 | NUCLEAR PORE COMPLEX PROTEIN NUP160 |
Ama22464 | NUCLEAR PORE COMPLEX PROTEIN NUP160 |
Ama22465 | RAS-LIKE FAMILY MEMBER 11 |
Ama22466 | RAS-LIKE FAMILY MEMBER 11 |
Ama22467 | SPORE COAT PROTEIN SP85 |
Ama22468 | |
Ama22469 | |
Ama22470 | PUTATIVE-RELATED |
Ama22472 | |
Ama22473 | |
Ama22477 | XANTHINE DEHYDROGENASE |
Ama22478 | |
Ama22480 | |
Ama22482 | RIKEN CDNA D130052B06 GENE |
Ama22483 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
Ama22486 | - |
Ama22488 | REVERSE TRANSCRIPTASES |
Ama22489 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama22490 | |
Ama22491 | ZINC FINGER PROTEIN |
Ama22492 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama22493 | - |
Ama22495 | TRANSPOSABLE ELEMENT-RELATED |
Ama22496 | |
Ama22499 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama224_5db7b01a | DEOXYNUCLEOSIDE KINASE |
Ama22500 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22501 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama22502 | TETRASPANIN |
Ama22503 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama22504 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18 |
Ama22505 | |
Ama22506 | |
Ama22509 | UNCHARACTERIZED |
Ama22510 | UNCHARACTERIZED |
Ama22511 | |
Ama22512 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |