The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama22346 | CCAAT DISPLACEMENT PROTEIN-RELATED |
Ama22347 | - |
Ama22350 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama22351 | |
Ama22353 | NUCLEOPORIN NUP84-RELATED |
Ama22354 | METALLOPHOSPHOESTERASE |
Ama22355 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22357 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama22361 | PROTEIN CBG03580 |
Ama22362 | PROTEIN CBG03580 |
Ama22363 | |
Ama22364 | |
Ama22365 | YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER |
Ama22366 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama22367 | YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER |
Ama22370 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama22372 | RAB GDP/GTP EXCHANGE FACTOR |
Ama22374 | MITOCHONDRIAL FISSION PROCESS PROTEIN 1 |
Ama22376 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama22378 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama22380 | CONDENSIN-2 COMPLEX SUBUNIT H2 |
Ama22384 | PROTEIN PITCHFORK |
Ama22392 | |
Ama22398 | ETHANOLAMINEPHOSPHOTRANSFERASE |
Ama223_5db7b01a | TRANSMEMBRANE PROTEIN 189 |
Ama22400 | |
Ama22401 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22402 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22403 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama22410 | |
Ama22412 | GH11727P |
Ama22413 | |
Ama22414 | |
Ama22415 | |
Ama22416 | |
Ama22417 | |
Ama22418 | |
Ama22421 | |
Ama22422 | PUTATIVE-RELATED |
Ama22425 | |
Ama22427 | LEUCINE ZIPPER PROTEIN 4-RELATED |
Ama22428 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
Ama22430 | V-TYPE PROTON ATPASE SUBUNIT C |
Ama22432 | |
Ama22434 | |
Ama22435 | BETA-HEXOSAMINIDASE |
Ama22436 | BETA-HEXOSAMINIDASE |
Ama22437 | UNCHARACTERIZED |
Ama22438 | |
Ama22439 | THIOREDOXIN-LIKE PROTEN 4A, 4B |