The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama22574 | |
Ama22576 | NUCLEOLAR PROTEIN OF 40 KDA |
Ama22577 | LIPID PHOSPHATE PHOSPHATASE |
Ama22580 | |
Ama22583 | |
Ama22585 | LEUCINE-RICH REPEAT-CONTAINING |
Ama22586 | |
Ama22587 | |
Ama22588 | FATTY ACID ACYL TRANSFERASE-RELATED |
Ama22589 | |
Ama22592 | IRON-SULFUR DOMAIN CONTAINING PROTEIN |
Ama22593 | |
Ama22594 | DNAJ HOMOLOG SUBFAMILY C MEMBER 25 |
Ama22595 | |
Ama22596 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
Ama22597 | |
Ama22598 | AGAP005574-PA |
Ama22599 | |
Ama225_5db7b01a | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama22600 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama22601 | REVERSE TRANSCRIPTASES |
Ama22602 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama22603 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama22604 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama22605 | |
Ama22606 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama22607 | THAP DOMAIN PROTEIN |
Ama22608 | |
Ama22609 | |
Ama22610 | |
Ama22611 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama22612 | THAP DOMAIN PROTEIN |
Ama22613 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama22614 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama22615 | |
Ama22616 | ZGC:195170 |
Ama22617 | SI:CH211-108C17.2-RELATED-RELATED |
Ama22618 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama22619 | |
Ama22620 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama22621 | TRANSPOSABLE ELEMENT-RELATED |
Ama22622 | |
Ama22623 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
Ama22624 | |
Ama22625 | PEPTIDASE |
Ama22626 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22627 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama22628 | |
Ama22629 | PUTATIVE-RELATED |
Ama22630 |