The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama22788 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22789 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
Ama22790 | NUCLEAR FUSION PROTEIN FUS2 |
Ama22794 | |
Ama22797 | UNCHARACTERIZED |
Ama227_5db7b01a | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 |
Ama22801 | UNCHARACTERIZED |
Ama22802 | ADP RIBOSYLATION FACTOR-RELATED |
Ama22804 | HIKESHI FAMILY MEMBER |
Ama22805 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22806 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22807 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22808 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22809 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22810 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22811 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22812 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22813 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22816 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22817 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22818 | GLUTAMATE--TRNA LIGASE |
Ama22819 | UNCHARACTERIZED |
Ama22820 | UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE |
Ama22821 | HISTONE H2A |
Ama22822 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22823 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Ama22825 | |
Ama22826 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama22827 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama22828 | |
Ama22829 | |
Ama22830 | TRANSPOSABLE ELEMENT-RELATED |
Ama22832 | RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B |
Ama22833 | VESICLE PROTEIN SORTING-ASSOCIATED |
Ama22834 | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED |
Ama22835 | PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL |
Ama22836 | PROHIBITIN |
Ama22837 | |
Ama22838 | |
Ama22839 | |
Ama22841 | |
Ama22842 | |
Ama22843 | CARBONYL REDUCTASE 1-RELATED |
Ama22844 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B |
Ama22845 | VACUOLAR PROTEIN SORTING 26 RELATED |
Ama22846 | MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB |
Ama22847 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
Ama22849 | SERINE PROTEASE-RELATED |
Ama22850 | GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1 |
Ama22851 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |