The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23071 | |
Ama23073 | |
Ama23074 | FATTY ACID SYNTHASE |
Ama23075 | FATTY ACID SYNTHASE |
Ama23077 | ETS |
Ama23078 | |
Ama23079 | CONDENSIN |
Ama23080 | TRANSPOSABLE ELEMENT-RELATED |
Ama23081 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23082 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
Ama23085 | TRANSCRIPTION INITIATION FACTOR TFIID |
Ama23087 | - |
Ama23090 | |
Ama23092 | |
Ama23093 | |
Ama23094 | |
Ama23095 | |
Ama23097 | TBC1 DOMAIN FAMILY MEMBER 7 |
Ama23099 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama230_5db7b01a | |
Ama23101 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama23102 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
Ama23103 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
Ama23104 | |
Ama23105 | |
Ama23106 | GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT |
Ama23109 | - |
Ama23110 | 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N |
Ama23111 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama23112 | HYDROLASE |
Ama23113 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD |
Ama23114 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
Ama23115 | |
Ama23117 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
Ama23118 | BLR2807 PROTEIN |
Ama23121 | RNA HELICASE |
Ama23127 | GUANYLYL CYCLASE |
Ama23132 | |
Ama23133 | LAR INTERACTING PROTEIN LIP -RELATED PROTEIN |
Ama23134 | LAR INTERACTING PROTEIN LIP -RELATED PROTEIN |
Ama23135 | PROTEIN CBG21859 |
Ama23136 | |
Ama23137 | |
Ama23138 | POLYPROTEIN, PUTATIVE-RELATED |
Ama23139 | 60S RIBOSOMAL PROTEIN L27A |
Ama23140 | ETS |
Ama23142 | |
Ama23143 | 40S RIBOSOMAL PROTEIN S26 |
Ama23144 | SUPPRESSOR OF VARIEGATION 4-20-RELATED |
Ama23146 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |