The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23349 | |
Ama23350 | |
Ama23351 | CYTOCHROME P450 FAMILY 4 |
Ama23354 | MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS |
Ama23355 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
Ama23357 | TRANSMEMBRANE PROTEIN 237 |
Ama23358 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama23360 | |
Ama23361 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama23362 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama23364 | UNCHARACTERIZED |
Ama23365 | |
Ama23366 | SPLICING FACTOR 3A SUBUNIT 2 |
Ama23370 | TRICHOHYALIN-RELATED |
Ama23373 | |
Ama23374 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
Ama23375 | TRANSPOSON |
Ama23376 | |
Ama23377 | COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER |
Ama23378 | |
Ama23380 | OTU DEUBIQUITINASE WITH LINEAR LINKAGE-SPECIFICITY A-RELATED |
Ama23381 | OPIOID GROWTH FACTOR RECEPTOR OGFR ZETA-TYPE OPIOID RECEPTOR |
Ama23382 | |
Ama23383 | |
Ama23384 | |
Ama23385 | DEP DOMAIN CONTAINING PROTEIN 5 |
Ama23386 | VERTNIN |
Ama23387 | OXIDOREDUCTASES |
Ama23388 | OXIDOREDUCTASES |
Ama23389 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama23393 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama23395 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Ama23396 | GUANYLYL CYCLASE |
Ama23397 | FI04035P |
Ama23401 | RAN BINDING PROTEIN 9-RELATED |
Ama23402 | 50S/60S RIBOSOMAL PROTEIN L16 |
Ama23404 | EXPRESSED PROTEIN |
Ama23405 | LAMIN DM0-RELATED |
Ama23406 | |
Ama23407 | 3'-5' EXONUCLEASE ERI1-RELATED |
Ama23408 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
Ama23409 | PORCUPINE |
Ama23410 | TUBULIN |
Ama23411 | OS01G0282866 PROTEIN |
Ama23412 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
Ama23413 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama23414 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama23416 | UNCHARACTERIZED |
Ama23417 | SET AND MYND DOMAIN-CONTAINING PROTEIN 4 |
Ama23418 | RNA HELICASE |