The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23816 | OVARIAN CARCINOMA ANTIGEN CA125-RELATED |
Ama23817 | THYMIDYLATE SYNTHASE 1 |
Ama23819 | |
Ama23820 | RIBOSOMAL PROTEIN S9 |
Ama23821 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama23822 | MYOTROPHIN |
Ama23823 | |
Ama23824 | CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR |
Ama23826 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Ama23827 | KINESIN-RELATED |
Ama23828 | |
Ama23831 | |
Ama23832 | ARCHAEMETZINCIN |
Ama23833 | TESTIS-EXPRESSED PROTEIN 52 |
Ama23834 | |
Ama23836 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama23837 | |
Ama23838 | |
Ama23839 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama23840 | THROMBOSPONDIN |
Ama23841 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama23842 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama23843 | PROTEIN PSIB-RELATED-RELATED |
Ama23844 | MULTICOPPER OXIDASE-RELATED |
Ama23845 | THROMBOSPONDIN |
Ama23846 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Ama23847 | MULTICOPPER OXIDASE-RELATED |
Ama23848 | THROMBOSPONDIN |
Ama23849 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama23850 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Ama23851 | |
Ama23853 | |
Ama23854 | |
Ama23855 | ZGC:194242 |
Ama23856 | |
Ama23857 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama23858 | |
Ama23861 | |
Ama23862 | THAP DOMAIN PROTEIN |
Ama23863 | |
Ama23864 | |
Ama23865 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23866 | |
Ama23867 | |
Ama23868 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama23869 | THAP DOMAIN PROTEIN |
Ama23870 | |
Ama23871 | |
Ama23872 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama23873 | THAP DOMAIN PROTEIN |