The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24024 | |
Ama24026 | TARSH-RELATED FIBRONECTIN DOMAIN-CONTAINING |
Ama24027 | PROTEIN CBG12474 |
Ama24029 | PROTEIN CBG12474 |
Ama24030 | PROTEIN CBG12474 |
Ama24031 | PROTEIN CBG12474 |
Ama24032 | PROTEIN CBG12474 |
Ama24033 | TRNA METHYLTRANSFERASE |
Ama24034 | TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 |
Ama24035 | |
Ama24038 | - |
Ama24039 | |
Ama24040 | |
Ama24041 | |
Ama24042 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama24043 | PROKARYOTIC DNA TOPOISOMERASE |
Ama24044 | METALLOPROTEASE INHIBITOR |
Ama24045 | SERINE/THREONINE-PROTEIN KINASE |
Ama24046 | BONUS, ISOFORM C-RELATED |
Ama24047 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
Ama24048 | PROTEIN CBG04600 |
Ama24049 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
Ama24050 | STANNIOCALCIN |
Ama24051 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24054 | |
Ama24056 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama24057 | TATA-BOX BINDING PROTEIN |
Ama24058 | |
Ama24059 | |
Ama24061 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama24062 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24063 | |
Ama24064 | |
Ama24067 | SULFATE TRANSPORTER |
Ama24069 | UNNAMED PRODUCT |
Ama24071 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
Ama24072 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama24073 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama24074 | |
Ama24079 | URICASE |
Ama24084 | |
Ama24086 | DNA POLYMERASE CATALYTIC SUBUNIT |
Ama24087 | DNA POLYMERASE CATALYTIC SUBUNIT |
Ama24089 | GENE, 17359-RELATED |
Ama24092 | ZGC:195170 |
Ama24098 | UNCHARACTERIZED |
Ama24099 | |
Ama24103 | |
Ama24106 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama24108 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |