The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24111 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
Ama24112 | |
Ama24114 | |
Ama24115 | - |
Ama24116 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama24117 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24118 | SOLUTE CARRIER FAMILY 39 |
Ama24120 | SOLUTE CARRIER FAMILY 39 |
Ama24121 | IP22168P |
Ama24122 | BETA-ALA-HIS DIPEPTIDASE |
Ama24124 | BETA-ALA-HIS DIPEPTIDASE |
Ama24125 | SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER |
Ama24128 | |
Ama24129 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama24130 | |
Ama24131 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama24133 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
Ama24135 | RHO GTPASE-ACTIVATING PROTEIN 190 |
Ama24136 | ROPPORIN-1-LIKE PROTEIN |
Ama24140 | |
Ama24141 | TRANSMEMBRANE PROTEIN |
Ama24142 | FORMIN-BINDING PROTEIN 4 |
Ama24143 | SYNEMBRYN |
Ama24144 | |
Ama24145 | SYNEMBRYN |
Ama24146 | |
Ama24147 | TOL-PAL SYSTEM PROTEIN TOLA |
Ama24149 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama24151 | GAMMA-SECRETASE SUBUNIT APH-1 |
Ama24152 | TROPONIN T |
Ama24153 | THISBE |
Ama24156 | |
Ama24157 | UNCHARACTERIZED |
Ama24159 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Ama24165 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24166 | - |
Ama24167 | UDP- GLUCOSE PYROPHOSPHORYLASE |
Ama24168 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama24172 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama24173 | |
Ama24174 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama24175 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama24176 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama24177 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24180 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24181 | TRANSMEMBRANE PROTEIN |
Ama24182 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
Ama24183 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
Ama24184 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama24185 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |