The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24189 | BLR6086 PROTEIN |
Ama24190 | HELICASE WITH DEATH DOMAIN-RELATED |
Ama24191 | |
Ama24192 | DICER-RELATED |
Ama24193 | |
Ama24194 | ATP-DEPENDENT DNA HELICASE |
Ama24195 | |
Ama24196 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24197 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24199 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama241_5db7b01a | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Ama24201 | FRIZZLED |
Ama24202 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24204 | REVERSE TRANSCRIPTASES |
Ama24205 | |
Ama24206 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24207 | |
Ama24208 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24209 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24210 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24212 | |
Ama24213 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
Ama24214 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama24215 | MYOTUBULARIN-RELATED |
Ama24216 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama24217 | CGI-141-RELATED/LIPASE CONTAINING PROTEIN |
Ama24219 | |
Ama24220 | INHIBITOR OF APOPTOSIS |
Ama24221 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama24222 | |
Ama24223 | |
Ama24224 | INHIBITOR OF APOPTOSIS |
Ama24225 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24226 | |
Ama24228 | |
Ama24230 | |
Ama24231 | |
Ama24232 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24234 | |
Ama24236 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama24238 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama24239 | |
Ama24247 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama24248 | |
Ama24249 | |
Ama24250 | |
Ama24251 | |
Ama24252 | |
Ama24253 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama24254 | PROTEIN CBG10425 |