The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24324 | |
Ama24325 | RAS-RELATED PROTEIN RAB |
Ama24326 | |
Ama24327 | RAS-RELATED PROTEIN RAB |
Ama24330 | |
Ama24332 | PUTATIVE-RELATED |
Ama24334 | |
Ama24336 | |
Ama24337 | THAP DOMAIN PROTEIN |
Ama24338 | |
Ama24340 | |
Ama24341 | OROTATE PHOSPHORIBOSYLTRANSFERASE |
Ama24342 | |
Ama24343 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
Ama24345 | ETS |
Ama24347 | XANTHINE DEHYDROGENASE |
Ama24353 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT |
Ama24354 | |
Ama24355 | NEUROLIGIN |
Ama24356 | |
Ama24357 | |
Ama24359 | CWF19, CELL CYCLE CONTROL PROTEIN |
Ama24360 | CWF19, CELL CYCLE CONTROL PROTEIN |
Ama24361 | INTEGRAL MEMBRANE PROTEIN GPR177 |
Ama24362 | INTEGRAL MEMBRANE PROTEIN GPR177 |
Ama24363 | INTEGRAL MEMBRANE PROTEIN GPR177 |
Ama24364 | SERINE/THREONINE-PROTEIN KINASE PLK |
Ama24366 | LEPRECAN 1 |
Ama24368 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24369 | |
Ama24370 | |
Ama24371 | |
Ama24372 | |
Ama24373 | ZINC FINGER PROTEIN ZIC AND GLI |
Ama24374 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
Ama24375 | ANKYRIN REPEAT AND MYND DOMAIN PROTEIN 1 |
Ama24376 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama24377 | |
Ama24379 | ADP-DEPENDENT GLUCOKINASE |
Ama24380 | G-PROTEIN COUPLED RECEPTOR |
Ama24381 | ADP-DEPENDENT GLUCOKINASE |
Ama24382 | G-PROTEIN COUPLED RECEPTOR |
Ama24383 | |
Ama24384 | |
Ama24385 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama24386 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD |
Ama24388 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
Ama243_5db7b01a | TETRASPANIN |
Ama24408 | ARRESTIN DOMAIN CONTAINING PROTEIN |
Ama24409 | GLUCOSE REPRESSIBLE PROTEIN MAK10 |