The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24562 | |
Ama24563 | |
Ama24564 | |
Ama24565 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24567 | G-PROTEIN COUPLED RECEPTOR |
Ama24568 | |
Ama24569 | |
Ama24570 | |
Ama24571 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama24572 | GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA |
Ama24573 | |
Ama24574 | ZINC FINGER RNA-BINDING PROTEIN |
Ama24575 | |
Ama24577 | COILED-COIL DOMAIN-CONTAINING PROTEIN 171 |
Ama24578 | |
Ama24579 | PUTATIVE-RELATED |
Ama24580 | |
Ama24581 | RIBONUCLEASE H1 |
Ama24582 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24583 | THAP DOMAIN PROTEIN |
Ama24584 | |
Ama24585 | |
Ama24586 | NUDIX HYDROLASE, NUDC SUBFAMILY |
Ama24589 | SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 |
Ama24592 | MITOGEN-ACTIVATED PROTEIN KINASE |
Ama24593 | ARRESTIN DOMAIN CONTAINING PROTEIN |
Ama24594 | RGM DOMAIN FAMILY MEMBER DRAG-1 |
Ama24596 | |
Ama24597 | |
Ama24601 | G-PROTEIN COUPLED RECEPTOR |
Ama24602 | SOLUTE CARRIER FAMILY 22 MEMBER |
Ama24603 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama24604 | |
Ama24605 | TRANSLATION ELONGATION FACTOR-RELATED |
Ama24606 | WD40 REPEAT PROTEIN |
Ama24607 | E3 UBIQUITIN-PROTEIN LIGASE HECTD3 |
Ama24608 | REGULATOR OF CHROMOSOME CONDENSATION |
Ama24609 | |
Ama24610 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama24611 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
Ama24613 | |
Ama24614 | BTK-BINDING PROTEIN-RELATED |
Ama24615 | PROTEASOME SUBUNIT ALPHA/BETA |
Ama24616 | CENTROSOMAL PROTEIN 2 |
Ama24619 | SYNAPTOTAGMIN |
Ama24620 | 4.1 G PROTEIN |
Ama24621 | |
Ama24622 | U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10 |
Ama24624 | |
Ama24625 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |