About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama24700MACROGLOBULIN / COMPLEMENT
Ama24701REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama24702
Ama24703
Ama24704
Ama24706SYNTENIN RELATED
Ama24707
Ama24708TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Ama24709
Ama24710
Ama24713
Ama24714CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama24715HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama24716HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama24717
Ama24718INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Ama24719PROTEIN CBG23764
Ama24720
Ama24721TRANSPOSON
Ama24722CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama24723THREE PRIME REPAIR EXONUCLEASE 1, 2
Ama24724
Ama24725ZINC FINGER PROTEIN
Ama24726
Ama24727
Ama24728LIM DOMAIN KINASE 1
Ama24729
Ama24730
Ama24731SYNTENIN RELATED
Ama24732SYNTENIN RELATED
Ama24733
Ama24734CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Ama24737HAUS AUGMIN-LIKE COMPLEX SUBUNIT 1
Ama24738INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Ama24739
Ama24740TATA-BOX BINDING PROTEIN
Ama24741BCL-2 RELATED
Ama24742RIBONUCLEASE P PROTEIN SUBUNIT P20
Ama24743ELFLESS, ISOFORM B
Ama24744
Ama24745PEPTIDASE M20
Ama24746RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG
Ama24747CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Ama24749CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Ama24750RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama24751INHIBITOR OF APOPTOSIS
Ama24752INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Ama24753CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Ama24754AP ENDONUCLEASE
Ama24755PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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