The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24756 | |
Ama24759 | DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED |
Ama24760 | UNCHARACTERIZED |
Ama24761 | |
Ama24764 | NICE-3 |
Ama24765 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Ama24766 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama24767 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
Ama24768 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24771 | SERUM RESPONSE FACTOR HOMOLOG |
Ama24772 | ANKYRIN REPEAT CONTAINING |
Ama24773 | |
Ama24775 | NUCLEAR HORMONE RECEPTOR |
Ama24776 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
Ama24778 | REGULATOR OF CHROMOSOME CONDENSATION |
Ama24779 | GLUCOSYLCERAMIDASE |
Ama24780 | COILED-COIL DOMAIN-CONTAINING PROTEIN 192 |
Ama24781 | UBIQUILIN |
Ama24782 | BRAKELESS PROTEIN |
Ama24784 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Ama24786 | ZGC:195170 |
Ama24787 | UNCHARACTERIZED |
Ama24789 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama24790 | G-PROTEIN COUPLED RECEPTOR |
Ama24792 | 39S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL |
Ama24793 | AAA-FAMILY ATPASE |
Ama24794 | OPSIN |
Ama24797 | |
Ama24799 | UBIQUITIN ASSOCIATED PROTEIN 2-LIKE/LINGERER |
Ama24800 | |
Ama24801 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama24802 | |
Ama24803 | OXIDASE/PEROXIDASE |
Ama24804 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama24805 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama24806 | THAP DOMAIN PROTEIN |
Ama24808 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama24809 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama24810 | TRANSPOSABLE ELEMENT-RELATED |
Ama24811 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama24812 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama24813 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama24814 | SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED |
Ama24815 | CST COMPLEX SUBUNIT CTC1 |
Ama24817 | - |
Ama24819 | CRUMBS FAMILY MEMBER |
Ama24820 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Ama24822 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama24823 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24824 |