The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24898 | |
Ama24899 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama248_5db7b01a | TRANSMEMBRANE PROTEIN 179 |
Ama24900 | TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2 |
Ama24901 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Ama24902 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
Ama24903 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
Ama24905 | |
Ama24907 | ARCHAEMETZINCIN |
Ama24908 | STEROL DESATURASE |
Ama24909 | TUBULIN |
Ama24910 | |
Ama24911 | |
Ama24912 | ZGC:195170 |
Ama24913 | SI:CH211-108C17.2-RELATED-RELATED |
Ama24914 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24916 | ANKYRIN REPEAT PROTEIN |
Ama24917 | |
Ama24918 | TETRASPANIN |
Ama24919 | |
Ama24920 | |
Ama24921 | UNCHARACTERIZED |
Ama24922 | HVA22-LIKE PROTEINS |
Ama24923 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
Ama24924 | CHAPERONIN |
Ama24925 | |
Ama24926 | CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A |
Ama24927 | RABCONNECTIN-RELATED |
Ama24928 | FOLLISTATIN-RELATED |
Ama24929 | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44 |
Ama24931 | |
Ama24932 | ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1 |
Ama24933 | HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY |
Ama24934 | RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 |
Ama24935 | |
Ama24936 | CHITIN SYNTHASE |
Ama24939 | ASPARTATE AMINOTRANSFERASE |
Ama24940 | G-PROTEIN COUPLED RECEPTOR |
Ama24941 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama24942 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24943 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama24944 | |
Ama24945 | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED |
Ama24946 | LUPUS LA PROTEIN-RELATED |
Ama24947 | CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 |
Ama24948 | THAP DOMAIN PROTEIN |
Ama24949 | MYOSIN |
Ama24950 | REVERSE TRANSCRIPTASES |
Ama24951 | FRUCTOSE-1,6-BISPHOSPHATASE-RELATED |
Ama24952 | PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED |