The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23874 | |
Ama23875 | OSJNBA0013A04.12 PROTEIN |
Ama23876 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama23877 | |
Ama23878 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Ama23882 | HOMEOBOX PROTEIN ARISTALESS |
Ama23883 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama23884 | SI:CH211-59O9.10 |
Ama23885 | SH3YL1 PROTEIN |
Ama23887 | |
Ama23888 | - |
Ama23889 | ATILLA, ISOFORM B-RELATED-RELATED |
Ama23890 | MITOCHONDRIAL DIVISION PROTEIN 1-RELATED |
Ama23891 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Ama23892 | |
Ama23895 | LD15586P |
Ama23896 | |
Ama23897 | |
Ama23898 | PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1 |
Ama23899 | UNCHARACTERIZED |
Ama23900 | GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4 |
Ama23901 | |
Ama23902 | BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE |
Ama23904 | DBX |
Ama23905 | PROTEIN FAM78A |
Ama23906 | PROTEIN FAM78A |
Ama23907 | ENOS INTERACTING PROTEIN |
Ama23908 | FIBRINOGEN ALPHA CHAIN |
Ama23909 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama23910 | MANNAN POLYMERASE II |
Ama23911 | S-ADENOSYL-METHYLTRANSFERASE MRAW |
Ama23912 | TETRASPANIN |
Ama23914 | OXIDOREDUCTASE HTATIP2 |
Ama23915 | HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER |
Ama23917 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
Ama23919 | |
Ama23921 | FI18025P1 |
Ama23923 | GLYCOGEN SYNTHASE |
Ama23924 | TUBULIN POLYGLUTAMYLASE |
Ama23925 | |
Ama23926 | |
Ama23927 | TTC17 PROTEIN |
Ama23930 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23931 | GUANYLYL CYCLASE |
Ama23932 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
Ama23933 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
Ama23936 | UNCHARACTERIZED |
Ama23937 | |
Ama23939 | |
Ama23940 | NUCLEAR PROTEIN 1 AND 2 |