The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama26412 | |
Ama26414 | |
Ama26415 | |
Ama26418 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
Ama26420 | |
Ama26421 | RBP-RELATED |
Ama26423 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
Ama26424 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26426 | |
Ama26427 | CYTOCHROME P450 26 |
Ama26429 | |
Ama26431 | |
Ama26432 | REVERSE TRANSCRIPTASES |
Ama26433 | LSM1 |
Ama26434 | G-PROTEIN COUPLED RECEPTOR |
Ama26435 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama26436 | BONUS, ISOFORM C-RELATED |
Ama26437 | TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER |
Ama26438 | PUTATIVE-RELATED |
Ama26439 | SYNTENIN RELATED |
Ama26441 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama26443 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama26444 | |
Ama26445 | |
Ama26446 | |
Ama26451 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama26452 | LYSYL OXIDASE-LIKE-RELATED |
Ama26453 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
Ama26457 | PHOSPHATIDYLINOSITOL GLYCAN, CLASS N |
Ama26458 | CHAPERONIN |
Ama26463 | SPHINGOMYELIN PHOSPHODIESTERASE |
Ama26465 | |
Ama26466 | TRANSMEMBRANE PROTEIN 128 |
Ama26467 | |
Ama26469 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26472 | SI:CH211-262H13.3-RELATED-RELATED |
Ama26474 | AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN |
Ama26477 | |
Ama26486 | |
Ama26487 | SPERMATOGENESIS-ASSOCIATED 4-RELATED |
Ama26488 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama26489 | |
Ama26490 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama26493 | |
Ama26494 | METALLOPROTEASE TIKI |
Ama26496 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM |
Ama26497 | |
Ama26498 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
Ama264_5db7b01a | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama26501 | SLIT HOMOLOG |