The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama26832 | NANOS PROTEIN |
Ama26833 | |
Ama26834 | |
Ama26838 | LIPID PHOSPHATE PHOSPHATASE |
Ama26839 | ANTIGEN 332, DBL-LIKE PROTEIN-RELATED |
Ama26840 | MOLTING PROTEIN MLT-4 |
Ama26843 | NUCLEOPLASMIN |
Ama26844 | PROTEIN FOLDING REGULATOR |
Ama26845 | LIMBIN/ELLIS-VAN CREVELD PROTEIN |
Ama26846 | PROTEIN PBDC1 |
Ama26847 | SUCCINATE DEHYDROGENASE |
Ama26849 | CYTOCHROME P450 |
Ama26850 | |
Ama26851 | |
Ama26852 | |
Ama26854 | |
Ama26855 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4 |
Ama26856 | |
Ama26857 | |
Ama26859 | |
Ama26860 | |
Ama26861 | TRANSPOSON |
Ama26862 | FMRFAMIDE RECEPTOR-RELATED |
Ama26864 | CYCLINS |
Ama26865 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama26867 | UNCHARACTERIZED |
Ama26874 | EPPIN |
Ama26876 | UNCHARACTERIZED |
Ama26877 | |
Ama26878 | UNCHARACTERIZED |
Ama26879 | TYROSINE-PROTEIN KINASE |
Ama26880 | |
Ama26881 | PUTATIVE-RELATED |
Ama26882 | |
Ama26883 | |
Ama26884 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama26885 | |
Ama26886 | |
Ama26887 | |
Ama26888 | |
Ama26889 | |
Ama26890 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama26891 | |
Ama26893 | |
Ama26894 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26895 | PROTEIN TAG-278-RELATED |
Ama26898 | |
Ama26899 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama26901 | |
Ama26902 | NEUROPEPTIDE Y RECEPTOR |