The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama27042 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama27044 | |
Ama27045 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama27046 | |
Ama27047 | |
Ama27048 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
Ama27049 | V-TYPE PROTON ATPASE SUBUNIT B |
Ama27050 | NHL REPEAT-CONTAINING PROTEIN 2 |
Ama27053 | |
Ama27054 | |
Ama27055 | UNCHARACTERIZED |
Ama27056 | TRANSPOSABLE ELEMENT-RELATED |
Ama27057 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama27059 | |
Ama27060 | |
Ama27061 | SERINE/ARGININE REPETITIVE MATRIX PROTEIN 5-RELATED |
Ama27062 | WD REPEAT-CONTAINING PROTEIN 11 |
Ama27063 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
Ama27065 | UNCHARACTERIZED |
Ama27067 | STEP II SPLICING FACTOR SLU7 |
Ama27068 | |
Ama27069 | ACYL CARRIER PROTEIN |
Ama27070 | ACYL CARRIER PROTEIN |
Ama27072 | |
Ama27074 | HISTONE H2A |
Ama27075 | |
Ama27076 | |
Ama27078 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
Ama27079 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
Ama27080 | |
Ama27081 | ZINC FINGER PROTEIN 142 |
Ama27082 | ZINC FINGER PROTEIN |
Ama27083 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama27084 | |
Ama27085 | |
Ama27086 | |
Ama27087 | |
Ama27088 | |
Ama27089 | |
Ama27090 | HISTONE ACETYLTRANSFERASE |
Ama27094 | CALCIUM BINDING PROTEINS |
Ama27097 | SOLUTE CARRIER FAMILY 40 MEMBER |
Ama27098 | VILLIN |
Ama27099 | VILLIN |
Ama270_5db7b01a | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Ama27100 | UNCHARACTERIZED |
Ama27101 | |
Ama27102 | |
Ama27103 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama27104 |