The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama26712 | |
Ama26713 | UNCHARACTERIZED |
Ama26714 | MONOCARBOXYLATE TRANSPORTER |
Ama26715 | |
Ama26716 | |
Ama26718 | LEUCINE AMINOPEPTIDASE-RELATED |
Ama26719 | BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN |
Ama26720 | ADDUCIN |
Ama26721 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26722 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26723 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26724 | SOX TRANSCRIPTION FACTOR |
Ama26725 | |
Ama26726 | |
Ama26727 | |
Ama26728 | |
Ama26729 | LIMBIN/ELLIS-VAN CREVELD PROTEIN |
Ama26730 | TUBULIN |
Ama26732 | ANTIGEN 332, DBL-LIKE PROTEIN-RELATED |
Ama26734 | |
Ama26736 | SYNAPTOBREVIN HOMOLOG YKT6 |
Ama26738 | ANTIGEN 332, DBL-LIKE PROTEIN-RELATED |
Ama26739 | ANTIGEN 332, DBL-LIKE PROTEIN-RELATED |
Ama26741 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama26742 | |
Ama26743 | |
Ama26744 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama26745 | |
Ama26746 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama26747 | |
Ama26748 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama26749 | |
Ama26750 | |
Ama26752 | |
Ama26753 | THAP DOMAIN PROTEIN |
Ama26754 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama26756 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama26757 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama26758 | |
Ama26759 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama26760 | |
Ama26761 | INTERFERON-INDUCED PROTEIN 35/NMI N-MYC/STAT INTERACTING PROTEIN |
Ama26766 | SI:CH211-108C17.2-RELATED-RELATED |
Ama26767 | |
Ama26769 | |
Ama26770 | ALPHA CATENIN |
Ama26771 | TRANSMEMBRANE PROTEIN 180 |
Ama26772 | ABRAXAS FAMILY MEMBER |
Ama26773 | IDURONATE 2-SULFATASE |
Ama26774 | IDURONATE 2-SULFATASE |