The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama26903 | TRANSPOSABLE ELEMENT-RELATED |
Ama26904 | |
Ama26908 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama26909 | PEPTIDASE |
Ama26912 | ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043 |
Ama26914 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama26915 | |
Ama26920 | RCG26366 |
Ama26921 | FMRFAMIDE RECEPTOR-RELATED |
Ama26922 | LIPASE MATURATION FACTOR |
Ama26923 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama26924 | SIDEROFLEXIN |
Ama26925 | ACYLPYRUVASE |
Ama26926 | HOMEOBOX PROTEIN NKX |
Ama26927 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama26928 | GPI TRANSAMIDASE COMPONENT PIG-S |
Ama26929 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama26930 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama26931 | GLUTAREDOXIN FAMILY MEMBER |
Ama26933 | POU DOMAIN |
Ama26934 | |
Ama26935 | AGAP004327-PA |
Ama26936 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama26937 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26938 | 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE |
Ama26940 | DELTEX-RELATED |
Ama26941 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama26942 | EXPRESSED PROTEIN |
Ama26943 | MRNA EXPORT FACTOR AND BUB3 |
Ama26944 | UNCHARACTERIZED |
Ama26945 | G-PROTEIN COUPLED RECEPTOR |
Ama26946 | |
Ama26947 | G-PROTEIN COUPLED RECEPTOR |
Ama26948 | G-PROTEIN COUPLED RECEPTOR |
Ama26949 | |
Ama26950 | |
Ama26952 | |
Ama26953 | |
Ama26954 | |
Ama26955 | |
Ama26957 | |
Ama26958 | |
Ama26960 | |
Ama26961 | HSPC111 PROTEIN-RELATED |
Ama26962 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
Ama26963 | COILED-COIL DOMAIN-CONTAINING PROTEIN 15 |
Ama26964 | RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG |
Ama26966 | SH3-BINDING |
Ama26969 | MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED |
Ama26970 | HOMEOBOX PROTEIN NKX |