The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama27337 | FIBRONECTIN TYPE 3 AND ANKYRIN REPEAT DOMAINS PROTEIN 1 |
Ama27339 | |
Ama27341 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
Ama27343 | |
Ama27345 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama27346 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama27348 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Ama27349 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Ama27350 | PHOSPHOLIPID ACYLTRANSFERASE |
Ama27353 | |
Ama27354 | TATA-BOX BINDING PROTEIN |
Ama27357 | PROTEIN CBG26694 |
Ama27358 | UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 2 |
Ama27359 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama27360 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama27361 | |
Ama27362 | |
Ama27363 | POLYCYSTIN FAMILY MEMBER |
Ama27364 | PA-PL1 PHOSPHOLIPASE FAMILY |
Ama27365 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
Ama27366 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama27367 | NICOTINAMIDE-NUCLEOTIDE AMIDOHYDROLASE PNCC |
Ama27368 | E3 UBIQUITIN-PROTEIN LIGASE RNF103 |
Ama27369 | |
Ama27370 | |
Ama27372 | |
Ama27373 | |
Ama27374 | |
Ama27375 | FORKHEAD BOX PROTEIN |
Ama27377 | HOMEOBOX PROTEIN EMX-RELATED |
Ama27378 | |
Ama27379 | |
Ama27380 | |
Ama27381 | NUCLEAR HORMONE RECEPTOR |
Ama27383 | C-TERMINAL-BINDING PROTEIN |
Ama27386 | MACROPHAGE ERYTHROBLAST ATTACHER-RELATED |
Ama27387 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
Ama27388 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
Ama27389 | SET AND MYND DOMAIN-CONTAINING PROTEIN 5 |
Ama27392 | MITOFILIN |
Ama27394 | HELICASE WITH DEATH DOMAIN-RELATED |
Ama27395 | |
Ama27396 | |
Ama27398 | HISTIDINE-RICH GLYCOPROTEIN |
Ama27399 | HELICASE WITH DEATH DOMAIN-RELATED |
Ama273_5db7b01a | |
Ama27400 | HELICASE WITH DEATH DOMAIN-RELATED |
Ama27401 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama27402 | |
Ama27404 |