The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama27489 | MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED |
Ama27491 | PROTEIN DPCD |
Ama27492 | VERY KIND PROTEIN |
Ama27493 | UNCHARACTERIZED |
Ama27496 | - |
Ama27497 | TUBULIN |
Ama27498 | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED |
Ama27499 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Ama274_5db7b01a | |
Ama27500 | DELTEX-RELATED |
Ama27501 | MICROTUBULE-ASSOCIATED PROTEIN 9 |
Ama27502 | |
Ama27504 | |
Ama27505 | PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED |
Ama27506 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama27507 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama27509 | - |
Ama27510 | ALPHA CATENIN |
Ama27511 | TRANSCRIPTION FACTOR AP-2 |
Ama27512 | |
Ama27513 | 3'-5' EXORIBONUCLEASE CSL4-RELATED |
Ama27514 | |
Ama27515 | BETA-ALANINE-ACTIVATING ENZYME |
Ama27517 | |
Ama27518 | |
Ama27519 | |
Ama27520 | |
Ama27523 | |
Ama27524 | DDRGK DOMAIN-CONTAINING PROTEIN 1 |
Ama27525 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
Ama27526 | |
Ama27527 | |
Ama27528 | COILED-COIL DOMAIN-CONTAINING PROTEIN 125 |
Ama27529 | COILED-COIL DOMAIN-CONTAINING PROTEIN 125 |
Ama27537 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama27538 | METAL TRANSPORTER CNNM |
Ama27539 | |
Ama27540 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama27544 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |
Ama27545 | |
Ama27546 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama27547 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
Ama27548 | HISTONE-LYSINE N-METHYLTRANSFERASE SMYD |
Ama27550 | |
Ama27560 | ACTIN |
Ama27561 | CALCIUM BINDING PROTEIN |
Ama27562 | CALCIUM BINDING PROTEIN |
Ama27563 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama27564 | ACTIN |
Ama27566 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |