The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama27813 | RIBONUCLEASE P SUBUNIT P30 |
Ama27814 | INACTIVE RHOMBOID PROTEIN |
Ama27816 | S-LAYER PROTEIN |
Ama27817 | EXOCYST COMPLEX COMPONENT 4 |
Ama27818 | EXOCYST COMPLEX COMPONENT 4 |
Ama27819 | EXOCYST COMPLEX COMPONENT 4 |
Ama27820 | BC025462 PROTEIN |
Ama27821 | HEXOKINASE |
Ama27822 | TRANSPOSON |
Ama27823 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama27825 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama27826 | AP ENDONUCLEASE |
Ama27827 | REVERSE TRANSCRIPTASES |
Ama27828 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama27829 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama27830 | UV-STIMULATED SCAFFOLD PROTEIN A |
Ama27831 | ZGC:195170 |
Ama27832 | SI:CH211-108C17.2-RELATED-RELATED |
Ama27833 | |
Ama27834 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama27837 | BIOTINIDASE-RELATED |
Ama27838 | UNCHARACTERIZED |
Ama27840 | |
Ama27841 | UNNAMED PRODUCT |
Ama27842 | UNNAMED PRODUCT |
Ama27843 | |
Ama27844 | UNNAMED PRODUCT |
Ama27845 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama27846 | UNNAMED PRODUCT |
Ama27847 | CEREBELLIN-RELATED |
Ama27848 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Ama27849 | |
Ama27850 | CEREBELLIN-RELATED |
Ama27851 | UNCHARACTERIZED |
Ama27852 | O-GLCNACASE |
Ama27853 | TETRASPANIN |
Ama27854 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT |
Ama27855 | ES1 PROTEIN HOMOLOG, MITOCHONDRIAL |
Ama27856 | 39S RIBOSOMAL PROTEIN L35, MITOCHONDRIAL |
Ama27857 | UNCHARACTERIZED |
Ama27858 | NITRILASE-RELATED |
Ama27859 | RIBONUCLEASE H2 SUBUNIT A |
Ama27860 | |
Ama27861 | MORN REPEAT-CONTAINING PROTEIN 4 |
Ama27863 | |
Ama27864 | TRANSCRIPTION FACTOR MLR1/2 |
Ama27866 | |
Ama27868 | |
Ama27871 | |
Ama27874 |