The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama29867 | O-ACYLTRANSFERASE |
Ama29868 | CYTOCHROME P450 508A4-RELATED |
Ama29870 | NITRIC OXIDE SYNTHASE-RELATED |
Ama29872 | NITRIC OXIDE SYNTHASE-RELATED |
Ama29873 | EXPRESSED PROTEIN |
Ama29874 | MULTIVESICULAR BODY SUBUNIT 12B |
Ama29875 | KINETOCHORE-ASSOCIATED PROTEIN DSN1 HOMOLOG |
Ama29877 | 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN |
Ama29878 | 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN |
Ama29879 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29880 | O-ACYLTRANSFERASE |
Ama29881 | O-ACYLTRANSFERASE |
Ama29882 | O-ACYLTRANSFERASE |
Ama29883 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
Ama29884 | |
Ama29885 | |
Ama29886 | TATA-BOX BINDING PROTEIN |
Ama29887 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama29888 | WSCD FAMILY MEMBER CG9164 |
Ama29889 | RIKEN CDNA 2310061I04 GENE |
Ama29890 | |
Ama29891 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 5 |
Ama29893 | FI18240P1-RELATED |
Ama29895 | HOMOSERINE O-ACETYLTRANSFERASE |
Ama29898 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
Ama29899 | |
Ama298_5db7b01a | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Ama29900 | NUCLEOPORIN NUP188 HOMOLOG |
Ama29901 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
Ama29902 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
Ama29903 | SIDEROFLEXIN |
Ama29904 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED |
Ama29905 | FORKHEAD BOX PROTEIN |
Ama29906 | UBIQUITIN-CONJUGATING ENZYME E2 |
Ama29910 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29911 | |
Ama29913 | IRON-SULFUR PROTEIN NUBPL |
Ama29914 | |
Ama29915 | SI:CH211-201H21.5-RELATED |
Ama29916 | UNCHARACTERIZED |
Ama29917 | ENDONUCLEASE RELATED |
Ama29918 | ENDONUCLEASE RELATED |
Ama29919 | TRANSCRIPTION INITIATION FACTOR IIB-RELATED |
Ama29920 | DIMETHYLANILINE MONOOXYGENASE |
Ama29921 | PUTATIVE-RELATED |
Ama29924 | LIM/HOMEOBOX PROTEIN LHX |
Ama29925 | INSULIN GENE ENHANCER PROTEIN |
Ama29926 | SJOEGREN SYNDROME NUCLEAR AUTOANTIGEN 1 |
Ama29927 | CEREBELLIN-RELATED |
Ama29928 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |