The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama29929 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama29930 | |
Ama29931 | MITOCHONDRIAL RIBOSOMAL PROTEIN S18B |
Ama29933 | SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED |
Ama29934 | MUCIN 4-RELATED |
Ama29937 | |
Ama29938 | |
Ama29939 | METHYLTRANSFERASE |
Ama29942 | HAMARTIN |
Ama29943 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 |
Ama29944 | OS02G0202900 PROTEIN |
Ama29945 | |
Ama29946 | |
Ama29947 | GLUTAMINE SYNTHETASE |
Ama29948 | GLUTAMINE SYNTHETASE |
Ama29949 | GLUTAMINE SYNTHETASE |
Ama29950 | AMMONIUM TRANSPORTER |
Ama29952 | |
Ama29953 | ARYLSULFATASE |
Ama29954 | CARBOHYDRATE SULFOTRANSFERASE |
Ama29955 | CARBOHYDRATE SULFOTRANSFERASE |
Ama29956 | |
Ama29957 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama29958 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama29959 | |
Ama29960 | |
Ama29961 | CARBOHYDRATE SULFOTRANSFERASE |
Ama29962 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama29964 | CARBOHYDRATE SULFOTRANSFERASE |
Ama29965 | |
Ama29966 | UNCHARACTERIZED |
Ama29967 | POLYCOMB-LIKE TRANSCRIPTION FACTOR |
Ama29968 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama29969 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama29970 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama29971 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama29972 | |
Ama29973 | |
Ama29974 | 39S RIBOSOMAL PROTEIN L14, MITOCHONDRIAL |
Ama29975 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29976 | |
Ama29977 | |
Ama29978 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29979 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29980 | |
Ama29982 | ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 19 |
Ama29983 | |
Ama29984 | |
Ama29985 | PROTEIN ODR-4 HOMOLOG |
Ama29986 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |