The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama30114 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama30116 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Ama30117 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B |
Ama30118 | NEMITIN (NEURONAL ENRICHED MAP INTERACTING PROTEIN) HOMOLOG |
Ama30119 | NEMITIN (NEURONAL ENRICHED MAP INTERACTING PROTEIN) HOMOLOG |
Ama30120 | |
Ama30121 | |
Ama30122 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
Ama30123 | |
Ama30124 | UNCHARACTERIZED |
Ama30125 | GABA-B RECEPTOR |
Ama30126 | |
Ama30127 | COLLAGEN ALPHA |
Ama30128 | COLLAGEN ALPHA |
Ama30129 | BETA-LACTAMASE-RELATED |
Ama30130 | PUTATIVE-RELATED |
Ama30131 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama30132 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama30133 | |
Ama30134 | FI04487P |
Ama30135 | CAVEOLIN |
Ama30136 | KINESIN-ASSOCIATED PROTEINS |
Ama30137 | CENTROSOMAL PROTEIN 2 |
Ama30138 | RADIAL SPOKEHEAD-RELATED |
Ama30139 | E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED |
Ama30140 | RIBONUCLEASE III |
Ama30141 | |
Ama30142 | |
Ama30143 | LIM/HOMEOBOX PROTEIN LHX |
Ama30144 | LIM/HOMEOBOX PROTEIN LHX |
Ama30145 | BAND 7 PROTEIN-RELATED |
Ama30147 | |
Ama30150 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama30151 | |
Ama30152 | BAND 7 PROTEIN-RELATED |
Ama30153 | |
Ama30154 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama30155 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama30156 | LD33804P |
Ama30157 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama30158 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama30159 | |
Ama30160 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama30161 | PAR-6-RELATED |
Ama30162 | SARCOSINE DEHYDROGENASE-RELATED |
Ama30163 | |
Ama30164 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama30165 | SNARE-ASSOCIATED PROTEIN SNAPIN |
Ama30166 | QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2 |
Ama30167 |