The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama30169 | |
Ama30170 | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE |
Ama30171 | S-ANTIGEN PROTEIN |
Ama30172 | |
Ama30173 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3 |
Ama30174 | S-ANTIGEN PROTEIN |
Ama30175 | 8-OXOGUANINE DNA GLYCOSYLASE |
Ama30176 | 8-OXOGUANINE DNA GLYCOSYLASE |
Ama30177 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama30178 | |
Ama30179 | UNCHARACTERIZED |
Ama30180 | BETA-AMYLOID BINDING PROTEIN-RELATED |
Ama30181 | |
Ama30182 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Ama30184 | |
Ama30185 | RAS GTPASE-RELATED |
Ama30186 | |
Ama30187 | GLUTAMATE CYSTEINE LIGASE REGULATORY SUBUNIT |
Ama30188 | RHOMBOID-RELATED PROTEIN |
Ama30190 | E3 UBIQUITIN-PROTEIN LIGASE UBR4 |
Ama30192 | |
Ama30193 | |
Ama30194 | L-CYSTEINE DESULFHYDRASE |
Ama30197 | BONUS, ISOFORM C-RELATED |
Ama30199 | TUBULIN POLYGLUTAMYLASE |
Ama301_5db7b01a | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Ama30200 | TUBULIN POLYGLUTAMYLASE |
Ama30202 | AGAP005574-PA |
Ama30203 | |
Ama30204 | SI:CH211-175M2.5 |
Ama30205 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama30208 | |
Ama30211 | GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5 |
Ama30212 | UNCHARACTERIZED |
Ama30213 | |
Ama30214 | |
Ama30215 | CARBOHYDRATE SULFOTRANSFERASE 15 |
Ama30216 | CARBOHYDRATE SULFOTRANSFERASE 15 |
Ama30217 | INTEGRATOR COMPLEX SUBUNIT 5 |
Ama30218 | INTEGRATOR COMPLEX SUBUNIT 5 |
Ama30220 | |
Ama30221 | |
Ama30222 | |
Ama30223 | PARANEOPLASTIC ANTIGEN |
Ama30224 | GALACTOCEREBROSIDASE |
Ama30225 | DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE |
Ama30226 | PRE-MRNA SPLICING FACTOR |
Ama30227 | |
Ama30228 | DNA REPAIR PROTEIN SWI5 HOMOLOG |
Ama30229 |