About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama30359SELENOPROTEIN F
Ama30360EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama30361THAP DOMAIN PROTEIN
Ama30362
Ama30363
Ama30364SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
Ama30366
Ama30368
Ama30369
Ama30371
Ama30374DYNAMIN
Ama30375FOLYLPOLYGLUTAMATE SYNTHASE-RELATED
Ama30376FOLYLPOLYGLUTAMATE SYNTHASE-RELATED
Ama30377FOLYLPOLYGLUTAMATE SYNTHASE-RELATED
Ama30378REPRESSOR OF YIELD OF DENV PROTEIN
Ama30379LIM/HOMEOBOX PROTEIN LHX
Ama30380LIM/HOMEOBOX PROTEIN LHX
Ama30381EXPRESSED PROTEIN
Ama30382REPRESSOR OF YIELD OF DENV PROTEIN
Ama30383
Ama30384REPRESSOR OF YIELD OF DENV PROTEIN
Ama30386
Ama30387GLYCOPROTEIN HORMONE RECEPTOR
Ama30388PLASMINOGEN-RELATED
Ama30389PLASMINOGEN-RELATED
Ama30390PLASMINOGEN-RELATED
Ama30391AP ENDONUCLEASE
Ama30392
Ama30393VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1
Ama30395VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1
Ama30397
Ama30398LD33804P
Ama30399ENDONUCLEASE V
Ama303_5db7b01aARRESTIN DOMAIN CONTAINING PROTEIN
Ama30400SPINSTER
Ama30401UNCHARACTERIZED
Ama30402LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Ama30403BONUS, ISOFORM C-RELATED
Ama30404
Ama30405SCAVENGER RECEPTOR CLASS F
Ama30406METALLOPROTEASE
Ama30408
Ama30409
Ama30411TRANSPOSON
Ama30412
Ama30413RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama30414INHIBITOR OF APOPTOSIS
Ama30415TRANSPOSABLE ELEMENT-RELATED
Ama30417
Ama30418
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