The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama297_5db7b01a | MONOCARBOXYLATE TRANSPORTER |
Ama29801 | |
Ama29805 | TRANSPOSON |
Ama29808 | |
Ama29809 | HOMEO BOX HB9 LIKE A-RELATED |
Ama29810 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama29811 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama29812 | O-ACYLTRANSFERASE |
Ama29813 | |
Ama29814 | |
Ama29817 | |
Ama29819 | HEH2P |
Ama29820 | |
Ama29821 | MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED |
Ama29823 | |
Ama29825 | |
Ama29826 | |
Ama29827 | |
Ama29828 | TUBULIN |
Ama29830 | |
Ama29831 | O-ACYLTRANSFERASE |
Ama29832 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama29833 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29834 | O-ACYLTRANSFERASE |
Ama29835 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama29836 | |
Ama29837 | |
Ama29839 | NACHT DOMAIN-CONTAINING PROTEIN |
Ama29840 | |
Ama29841 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29842 | |
Ama29843 | O-ACYLTRANSFERASE |
Ama29845 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29846 | |
Ama29847 | |
Ama29850 | |
Ama29852 | |
Ama29853 | |
Ama29854 | |
Ama29855 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29856 | NACHT DOMAIN-CONTAINING PROTEIN |
Ama29857 | |
Ama29858 | |
Ama29859 | O-ACYLTRANSFERASE |
Ama29861 | |
Ama29862 | |
Ama29863 | |
Ama29864 | O-ACYLTRANSFERASE |
Ama29865 | O-ACYLTRANSFERASE |
Ama29866 | O-ACYLTRANSFERASE |