The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama30616 | |
Ama30617 | TUBULIN |
Ama30618 | TUBULIN |
Ama30619 | THAP DOMAIN PROTEIN |
Ama30620 | MONOCARBOXYLATE TRANSPORTER |
Ama30621 | TUBULIN |
Ama30622 | |
Ama30624 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30625 | |
Ama30627 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
Ama30628 | |
Ama30629 | MONOCARBOXYLATE TRANSPORTER |
Ama30630 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30631 | |
Ama30636 | |
Ama30637 | |
Ama30638 | |
Ama30639 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30643 | |
Ama30644 | |
Ama30645 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30646 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30647 | TRANSPOSON |
Ama30648 | |
Ama30649 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30650 | |
Ama30651 | FIBROUS SHEATH CABYR-BINDING PROTEIN |
Ama30652 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30653 | KERATIN ASSOCIATED PROTEIN 3-3-RELATED |
Ama30655 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama30656 | |
Ama30658 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30659 | |
Ama30660 | |
Ama30661 | |
Ama30662 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
Ama30663 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30664 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30665 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30666 | TUBULIN |
Ama30667 | |
Ama30668 | |
Ama30669 | |
Ama30670 | |
Ama30672 | |
Ama30674 | |
Ama30676 | DOPAMINE BETA HYDROXYLASE RELATED |
Ama30679 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama30680 | INHIBITOR OF APOPTOSIS |
Ama30681 | NOTCH LIGAND FAMILY MEMBER |