The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama30758 | TRANSPOSON |
Ama30759 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama30761 | SI:CH211-59O9.10 |
Ama30762 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama30764 | SI:CH211-59O9.10 |
Ama30765 | |
Ama30768 | NETRIN/LAMININ-RELATED |
Ama30770 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20-RELATED |
Ama30772 | QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE |
Ama30773 | DNA HELICASE RECQ FAMILY MEMBER |
Ama30776 | REVERSE TRANSCRIPTASES |
Ama30777 | UNCHARACTERIZED |
Ama30780 | CRUMBS FAMILY MEMBER |
Ama30784 | SOLUTE CARRIER FAMILY 5 |
Ama30785 | |
Ama30786 | RAPSYN-RELATED |
Ama30787 | |
Ama30788 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
Ama30789 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
Ama30790 | ARRESTIN DOMAIN CONTAINING PROTEIN |
Ama30791 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
Ama30795 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama30796 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama30797 | HYR DOMAIN-CONTAINING PROTEIN |
Ama30798 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Ama30799 | HYR DOMAIN-CONTAINING PROTEIN |
Ama307_5db7b01a | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama30800 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama30801 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama30803 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama30804 | UNCHARACTERIZED |
Ama30805 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
Ama30806 | UNCHARACTERIZED |
Ama30807 | |
Ama30809 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
Ama30811 | L-ASPARAGINASE |
Ama30812 | |
Ama30813 | SI:CH211-266K2.1 |
Ama30817 | RIBOSOMAL PROTEIN S7 |
Ama30818 | RIBOSOMAL PROTEIN S7 |
Ama30820 | |
Ama30821 | ZGC:101858 |
Ama30822 | PNAS-3 RELATED |
Ama30823 | FK506-BINDING PROTEIN 15 |
Ama30824 | FK506-BINDING PROTEIN 15 |
Ama30825 | UNCHARACTERIZED |
Ama30826 | UBIQUINONE BIOSYNTHESIS PROTEIN |
Ama30827 | AKNA DOMAIN-CONTAINING PROTEIN |
Ama30828 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN15 |
Ama30829 | SI:CH211-59O9.10 |