The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama30893 | |
Ama30894 | HYR DOMAIN-CONTAINING PROTEIN |
Ama30895 | |
Ama30896 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
Ama30897 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama30898 | INHIBITOR OF APOPTOSIS |
Ama30900 | ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 |
Ama30903 | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS |
Ama30904 | THAP DOMAIN PROTEIN |
Ama30905 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama30906 | |
Ama30907 | UNCHARACTERIZED |
Ama30909 | ENDONUCLEASE-RELATED |
Ama30910 | NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A |
Ama30911 | |
Ama30914 | DNA POLYMERASE EPSILON SUBUNIT 3 |
Ama30915 | |
Ama30916 | |
Ama30917 | UNCHARACTERIZED |
Ama30918 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama30919 | |
Ama30920 | TRANSPOSON |
Ama30921 | SJOEGREN SYNDROME NUCLEAR AUTOANTIGEN 1 |
Ama30922 | B-CELL LYMPHOMA/LEUKEMIA 10 |
Ama30923 | SJOEGREN SYNDROME NUCLEAR AUTOANTIGEN 1 |
Ama30924 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
Ama30925 | IMMEDIATE EARLY RESPONSE GENE |
Ama30926 | |
Ama30927 | |
Ama30928 | |
Ama30929 | WNT RELATED |
Ama30930 | E3 UBIQUITIN-PROTEIN LIGASE RNF26 |
Ama30931 | MCG48959-RELATED |
Ama30932 | TRANSPOSABLE ELEMENT-RELATED |
Ama30934 | RAS GTPASE-ACTIVATING PROTEINS |
Ama30935 | |
Ama30936 | GLYCOPROTEIN HORMONE RECEPTOR |
Ama30944 | |
Ama30945 | |
Ama30946 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
Ama30947 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama30948 | INHIBITOR OF APOPTOSIS |
Ama30949 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama30950 | ACTIN |
Ama30951 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
Ama30952 | UNCHARACTERIZED |
Ama30953 | REVERSE TRANSCRIPTASES |
Ama30954 | CELL DIVISION PROTEIN KINASE |
Ama30955 | FLOTILLIN-RELATED |
Ama30958 | BREAST CANCER ANTI-ESTROGEN RESISTANCE PROTEIN 3 HOMOLOG-LIKE PROTEIN |