About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama30961SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Ama30962
Ama30963METHYLTRANSFERASE
Ama30964CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 157
Ama30965PHOSPHATIDYLINOSITOL GLYCAN, CLASS C
Ama30966
Ama30968
Ama30969
Ama30970CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama30971DIMETHYLARGININE DIMETHYLAMINOHYDROLASE
Ama30973
Ama30974
Ama30975SPOT14 FAMILY MEMBER
Ama30976ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama30977
Ama30978MEMBRANE PROTEIN CH1 RELATED
Ama30980ATP-DEPENDENT RNA HELICASE
Ama30982
Ama30983-
Ama30984UNCHARACTERIZED
Ama30985UNCHARACTERIZED
Ama30986EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama30987MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE
Ama30988PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama30989
Ama30990CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama30991
Ama30992REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama30993
Ama30996UNCHARACTERIZED
Ama30997TRANSPOSABLE ELEMENT-RELATED
Ama30998TRANSPOSABLE ELEMENT-RELATED
Ama309_5db7b01aRAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Ama30_5db7b01aGRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Ama31000-
Ama31001RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE
Ama31002RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE
Ama31003WD40 REPEAT PROTEIN
Ama31004WD40 REPEAT PROTEIN
Ama31005TYROSINE-PROTEIN KINASE
Ama31006ARP2/3 COMPLEX 21 KD SUBUNIT
Ama31007ARP2/3 COMPLEX 21 KD SUBUNIT
Ama31008ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13
Ama31009G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP
Ama31010CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama31011VOLTAGE-GATED POTASSIUM CHANNEL
Ama31012VOLTAGE-GATED POTASSIUM CHANNEL
Ama31016DIPHTHINE SYNTHASE
Ama31018RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama31019TATA-BOX BINDING PROTEIN
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