The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama30682 | FI04643P-RELATED |
Ama30684 | |
Ama30685 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama30686 | INHIBITOR OF APOPTOSIS |
Ama30691 | |
Ama30695 | |
Ama30696 | |
Ama30698 | |
Ama306_5db7b01a | - |
Ama30702 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama30703 | |
Ama30704 | TUBULIN |
Ama30705 | TUBULIN |
Ama30706 | TRANSPOSON |
Ama30707 | MONOCARBOXYLATE TRANSPORTER |
Ama30708 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30713 | FIBRILLIN-RELATED |
Ama30714 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30715 | |
Ama30716 | |
Ama30717 | |
Ama30718 | |
Ama30719 | |
Ama30720 | |
Ama30721 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama30722 | NACHT DOMAIN-CONTAINING PROTEIN |
Ama30723 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama30726 | TUBULIN |
Ama30727 | TUBULIN |
Ama30728 | TUBULIN |
Ama30730 | HOMEOBOX PROTEIN NKX |
Ama30731 | HOMEOBOX PROTEIN NKX |
Ama30732 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
Ama30733 | |
Ama30734 | CYCLINS |
Ama30735 | IP01015P-RELATED |
Ama30736 | 30S RIBOSOMAL PROTEIN S18 |
Ama30739 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama30740 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
Ama30741 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama30742 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30745 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama30746 | 50 KDA SPICULE MATRIX PROTEIN-RELATED |
Ama30747 | |
Ama30749 | |
Ama30752 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama30754 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30755 | |
Ama30756 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama30757 |