About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama31377
Ama31378RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama31379INHIBITOR OF APOPTOSIS
Ama31380ZYX102 PROTEIN
Ama31382HOMEOBOX PROTEIN
Ama31384GLYCOSYLTRANSFERASE-LIKE 1
Ama31385ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Ama31387ACETYLTRANSFERASE
Ama31389ACETYLTRANSFERASE
Ama31390L1 TRANSPOSABLE ELEMENT-RELATED
Ama31391REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama31392SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Ama31393SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Ama31395
Ama31396SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Ama31398INTEGRIN BETA SUBUNIT
Ama31399REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama313_5db7b01aAROMATIC AMINO ACID HYDROXYLASE
Ama31400
Ama31402THAP DOMAIN PROTEIN
Ama31403OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Ama31404SERINE/THREONINE-PROTEIN KINASE NEK
Ama31408PROTEIN STAR
Ama31409SORTING NEXIN
Ama31410PROTEIN STAR
Ama31413
Ama31414OXIDASE/PEROXIDASE
Ama31415ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Ama31416ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Ama31417
Ama31418
Ama31419
Ama31421MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
Ama31422TRANSPOSABLE ELEMENT-RELATED
Ama31423L1 TRANSPOSABLE ELEMENT-RELATED
Ama31424REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Ama31425MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
Ama31426SYNAPTOTAGMIN
Ama31427ZINC FINGER MYND DOMAIN-CONTAINING
Ama31428
Ama31429FORMIMINOTRANSFERASE-CYCLODEAMINASE
Ama31430PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Ama31431CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama31433THAP DOMAIN PROTEIN
Ama31434TOLL-LIKE RECEPTOR
Ama31435THAP DOMAIN PROTEIN
Ama31436EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama31437TOLL-LIKE RECEPTOR
Ama31438ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Ama31440
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