The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama31253 | |
Ama31254 | CELL CYCLE CONTROL PROTEIN CWF22-RELATED |
Ama31255 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama31256 | |
Ama31257 | CENTROSOMAL PROTEIN POC5 |
Ama31258 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama31259 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama31260 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
Ama31261 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
Ama31266 | MARINER MOS1 TRANSPOSASE-LIKE PROTEIN |
Ama31267 | EXPRESSED PROTEIN |
Ama31268 | |
Ama31269 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
Ama31270 | PEPTIDASE |
Ama31271 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama31277 | LEUCOKININ RECEPTOR-RELATED |
Ama31278 | |
Ama31279 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama31280 | TRANSPOSABLE ELEMENT-RELATED |
Ama31281 | |
Ama31282 | |
Ama31283 | ALADIN/ADRACALIN/AAAS |
Ama31285 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama31286 | |
Ama31287 | BETA1,3-GALACTOSYLTRANSFERASE |
Ama31288 | |
Ama31289 | |
Ama31291 | |
Ama31292 | CITRATE SYNTHASE |
Ama31293 | |
Ama31294 | GLUTATHIONE S-TRANSFERASE |
Ama31295 | |
Ama31296 | |
Ama31297 | PARTNER OF BURSICON |
Ama31298 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama312_5db7b01a | NEUROTRANSMITTER GATED ION CHANNEL |
Ama31300 | |
Ama31301 | RHO FAMILY GTPASE |
Ama31302 | UNCHARACTERIZED |
Ama31303 | |
Ama31304 | VESICLE-TRAFFICKING PROTEIN SEC22B |
Ama31305 | BETA LACTAMASE DOMAIN |
Ama31306 | |
Ama31307 | |
Ama31308 | DUAL SPECIFICITY PROTEIN PHOSPHATASE 19 |
Ama31309 | BONUS, ISOFORM C-RELATED |
Ama31311 | |
Ama31312 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
Ama31313 | SPERM-ASSOCIATED ANTIGEN 6 ARMADILLO REPEAT-CONTAINING |
Ama31314 | CDGSH IRON SULFUR DOMAIN PROTEIN HOMOLOG |