The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama31644 | |
Ama31645 | DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1 |
Ama31646 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama31649 | |
Ama31650 | ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 |
Ama31651 | GH17980P-RELATED |
Ama31652 | GH17980P-RELATED |
Ama31659 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama31661 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
Ama31662 | HEPACAM FAMILY MEMBER 2-RELATED |
Ama31663 | CONTACTIN 5 |
Ama31664 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama31665 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama31666 | |
Ama31668 | KELCH PROTEIN |
Ama31670 | INHIBITOR OF APOPTOSIS |
Ama31671 | INHIBITOR OF APOPTOSIS |
Ama31673 | |
Ama31674 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama31675 | INHIBITOR OF APOPTOSIS |
Ama31676 | METHYLTRANSFERASE-RELATED |
Ama31678 | ZINC FINGER PROTEIN |
Ama31681 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama31682 | TBP-1 INTERACTING PROTEIN |
Ama31683 | HL07962P-RELATED |
Ama31684 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
Ama31685 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
Ama31686 | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER |
Ama31688 | |
Ama31689 | RESPIRATORY NITRATE REDUCTASE |
Ama31690 | ANION EXCHANGE PROTEIN |
Ama31692 | |
Ama31693 | |
Ama31694 | |
Ama31695 | ADENYLATE CYCLASE TYPE 1 |
Ama31697 | 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1 |
Ama31698 | EXPRESSED PROTEIN |
Ama31699 | MULTICOPPER OXIDASE-RELATED |
Ama316_5db7b01a | |
Ama31700 | EXPRESSED PROTEIN |
Ama31701 | |
Ama31702 | EXPRESSED PROTEIN |
Ama31703 | |
Ama31704 | MULTICOPPER OXIDASE-RELATED |
Ama31705 | |
Ama31706 | |
Ama31707 | HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE |
Ama31708 | NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED |
Ama31709 | RNA (RNA) POLYMERASE II ASSOCIATED PROTEIN HOMOLOG |
Ama31710 | BONUS, ISOFORM C-RELATED |