The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama31711 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
Ama31712 | |
Ama31713 | COILED-COIL DOMAIN-CONTAINING PROTEIN 173 |
Ama31714 | PHOSPHATASE, ORPHAN 1, 2 |
Ama31715 | |
Ama31716 | ADENYLATE CYCLASE TYPE 1 |
Ama31717 | |
Ama31718 | PHD FINGER PROTEINS |
Ama31719 | |
Ama31720 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Ama31721 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Ama31722 | POLY A POLYMERASE CID PAP -RELATED |
Ama31723 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama31724 | |
Ama31725 | |
Ama31726 | |
Ama31727 | |
Ama31728 | DYNEIN LIGHT CHAIN |
Ama31729 | DYNEIN LIGHT CHAIN |
Ama31730 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama31731 | |
Ama31732 | REGULATOR OF MICROTUBULE DYNAMICS PROTEIN |
Ama31733 | SERINE/THREONINE-PROTEIN KINASE 17 |
Ama31734 | |
Ama31735 | ANNEXIN |
Ama31736 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31737 | DYNEIN LIGHT CHAIN |
Ama31738 | DYNEIN LIGHT CHAIN |
Ama31739 | DYNEIN LIGHT CHAIN |
Ama31740 | DYNEIN LIGHT CHAIN |
Ama31741 | |
Ama31742 | DYNEIN LIGHT CHAIN |
Ama31743 | DYNEIN LIGHT CHAIN |
Ama31744 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama31745 | DYNEIN LIGHT CHAIN |
Ama31746 | |
Ama31747 | SECERNIN |
Ama31748 | NOP SEVEN ASSOCIATED PROTEIN 1 |
Ama31749 | ACTIVATOR OF S-PHASE KINASE-RELATED |
Ama31751 | |
Ama31752 | SOLUTE CARRIER FAMILY 35, MEMBER F5 |
Ama31753 | LSM12 HOMOLOG |
Ama31754 | SERINE-THREONINE PROTEIN KINASE |
Ama31755 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Ama31756 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31757 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31758 | |
Ama31760 | |
Ama31761 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31762 |