The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama31764 | UNCHARACTERIZED |
Ama31765 | |
Ama31766 | DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL |
Ama31767 | UNCHARACTERIZED |
Ama31768 | ALANINE AMINOTRANSFERASE |
Ama31769 | BTB/POZ DOMAIN-CONTAINING |
Ama31770 | UNCHARACTERIZED |
Ama31772 | G-PROTEIN COUPLED RECEPTOR |
Ama31773 | |
Ama31774 | AMINOTRANSFERASE |
Ama31775 | |
Ama31776 | MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE |
Ama31777 | PROTEIN CBG12054-RELATED |
Ama31778 | |
Ama31779 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama31781 | TELOMERASE REVERSE TRANSCRIPTASE |
Ama31782 | INOSITOL POLYPHOSPHATE KINASE |
Ama31783 | - |
Ama31785 | IP01015P-RELATED |
Ama31788 | INOSITOL POLYPHOSPHATE KINASE |
Ama31789 | |
Ama31790 | |
Ama31791 | |
Ama31792 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31793 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
Ama31794 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
Ama31795 | THAP DOMAIN PROTEIN |
Ama31796 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama31797 | THAP DOMAIN PROTEIN |
Ama31798 | |
Ama317_5db7b01a | NEURABIN |
Ama31800 | |
Ama31802 | |
Ama31803 | |
Ama31804 | |
Ama31808 | LONGEVITY ASSURANCE FACTOR 1 LAG1 |
Ama31809 | |
Ama31813 | BETA-CAROTENE DIOXYGENASE |
Ama31814 | CARBOHYDRATE SULFOTRANSFERASE |
Ama31815 | |
Ama31816 | ANKYRIN REPEAT PROTEIN |
Ama31817 | COLLAGEN ALPHA |
Ama31818 | COLLAGEN ALPHA |
Ama31820 | SPERM PROTEIN HOMOLOG |
Ama31821 | SPLICING FACTOR 3B, SUBUNIT 1-RELATED |
Ama31822 | LONGEVITY ASSURANCE FACTOR 1 LAG1 |
Ama31824 | INTEGRIN ALPHA |
Ama31825 | DNAJ HOMOLOG SUBFAMILY C MEMBER 2 |
Ama31826 | DNAJ HOMOLOG SUBFAMILY C MEMBER 1 |
Ama31827 | GATOR COMPLEX PROTEIN WDR24 |