About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama318_5db7b01aCLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
Ama31900
Ama31901REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama31902
Ama31903
Ama31904
Ama31905DPY-19-LIKE 1, LIKE (H. SAPIENS)
Ama31906SPERMATOGENESIS-ASSOCIATED PROTEIN 48
Ama31907
Ama31908
Ama31909UNCHARACTERIZED
Ama31910THIOESTERASE SUPERFAMILY MEMBER-RELATED
Ama31911EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama31912
Ama31913
Ama31914CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama31916ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Ama31917
Ama31918TYROSINE-PROTEIN KINASE RECEPTOR
Ama31921CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama31922
Ama31924DUF614 FAMILY PROTEIN-RELATED
Ama31925DUF614 FAMILY PROTEIN-RELATED
Ama31926DUF614 FAMILY PROTEIN-RELATED
Ama31927SODIUM/POTASSIUM/CALCIUM EXCHANGER
Ama31928SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Ama31929UNCHARACTERIZED
Ama31930SACSIN
Ama31934VACUOLAR PROTEIN SORTING VPS41
Ama31935VACUOLAR PROTEIN SORTING VPS41
Ama31936VACUOLAR PROTEIN SORTING VPS41
Ama31937VACUOLAR PROTEIN SORTING VPS41
Ama31938ATP-DEPENDENT RNA HELICASE DBP3
Ama31939EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama31940THAP DOMAIN PROTEIN
Ama31941
Ama31942ESTERASE OVCA2
Ama31943REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama31944ACTIN
Ama3194552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama31946STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Ama31948
Ama31949
Ama31950DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2
Ama31951DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2
Ama31952FATTY ACID AMIDE HYDROLASE
Ama319582-HYDROXYACYL-COA LYASE
Ama31959-
Ama31960ADP RIBOSYLATION FACTOR-RELATED
Ama31962ADP RIBOSYLATION FACTOR-RELATED
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