The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama32021 | KINETOCHORE PROTEIN SPC25-RELATED |
Ama32022 | RAS-RELATED PROTEIN RAB |
Ama32023 | |
Ama32025 | CYTOCHROME C |
Ama32026 | |
Ama32028 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
Ama32029 | |
Ama32030 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama32033 | |
Ama32034 | |
Ama32036 | SYNAPTOTAGMIN |
Ama32037 | RAD25/XP-B DNA REPAIR HELICASE |
Ama32038 | LOQUACIOUS, ISOFORM B |
Ama32039 | |
Ama32040 | PROTEIN YELLOW-RELATED |
Ama32042 | REVERSE TRANSCRIPTASES |
Ama32043 | |
Ama32044 | |
Ama32046 | PARTITIONING DEFECTIVE 3 RELATED |
Ama32047 | PARTITIONING DEFECTIVE 3 RELATED |
Ama32051 | CEREBELLIN-RELATED |
Ama32055 | MYOSIN |
Ama32056 | |
Ama32062 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama32064 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama32065 | |
Ama32066 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama32067 | |
Ama32069 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama32070 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama32071 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama32074 | PROTEASE S51 ALPHA-ASPARTYL DIPEPTIDASE |
Ama32075 | |
Ama32078 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama32079 | 10 KDA HEAT SHOCK PROTEIN |
Ama32080 | 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL |
Ama32081 | FMRFAMIDE RECEPTOR-RELATED |
Ama32083 | TRICHOHYALIN-RELATED |
Ama32084 | TRANSPOSABLE ELEMENT-RELATED |
Ama32085 | BARDET-BIEDL SYNDROME PROTEIN 5 |
Ama32086 | |
Ama32087 | ATP SYNTHASE |
Ama32088 | |
Ama32089 | CBF1 INTERACTING COREPRESSOR CIR |
Ama32090 | PROTEIN HGH1 HOMOLOG |
Ama32091 | MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE |
Ama320_5db7b01a | |
Ama32100 | BETA1,3-GALACTOSYLTRANSFERASE |
Ama32101 | |
Ama32102 | THAP DOMAIN PROTEIN |