The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama32380 | |
Ama32381 | |
Ama32382 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Ama32386 | GLYCOPROTEIN HORMONE RECEPTOR |
Ama32387 | AMINO ACID TRANSPORTER |
Ama32388 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama32391 | |
Ama32392 | |
Ama32394 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama32397 | |
Ama32398 | |
Ama32399 | |
Ama323_5db7b01a | SYNTAXIN |
Ama32400 | |
Ama32427 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
Ama32429 | UNCHARACTERIZED |
Ama32430 | |
Ama32431 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama32432 | PROTEIN CBG26694 |
Ama32433 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama32434 | |
Ama32435 | INHIBITOR OF APOPTOSIS |
Ama32436 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama32442 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama32443 | HEH2P |
Ama32444 | DEP DOMAIN PROTEIN |
Ama32445 | DEP DOMAIN PROTEIN |
Ama32447 | |
Ama32449 | |
Ama32450 | |
Ama32451 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama32452 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama32455 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Ama32457 | |
Ama32458 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Ama32460 | HEAVY CHAIN, PUTATIVE-RELATED |
Ama32461 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
Ama32462 | 3-HYDROXYACYL-COA DEHYROGENASE |
Ama32463 | |
Ama32464 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama32466 | TOLL-LIKE RECEPTOR |
Ama32467 | |
Ama32468 | TUBULIN |
Ama32469 | |
Ama32470 | TRANSMEMBRANE PROTEIN 98 |
Ama32473 | STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN |
Ama32474 | STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN |
Ama32475 | STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN |
Ama32476 | ARP2/3 COMPLEX 34 KDA SUBUNIT |
Ama32477 |