The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama32816 | EXPRESSED PROTEIN |
Ama32818 | |
Ama32819 | BONUS, ISOFORM C-RELATED |
Ama32821 | |
Ama32824 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
Ama32825 | |
Ama32826 | SELENOPROTEIN T |
Ama32827 | TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR |
Ama32828 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
Ama32830 | DISCS LARGE |
Ama32831 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
Ama32833 | EPITHELIAL-STROMAL INTERACTION PROTEIN 1 |
Ama32834 | PR DOMAIN ZINC FINGER PROTEIN |
Ama32835 | |
Ama32836 | |
Ama32837 | |
Ama32838 | REMODELING AND SPACING FACTOR 1 |
Ama32839 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama32840 | |
Ama32841 | FI21293P1 |
Ama32842 | UNCHARACTERIZED |
Ama32843 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama32844 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama32847 | STIMULATOR OF INTERFERON GENES PROTEIN |
Ama32848 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
Ama32849 | CYTOSOLIC PHOSPHOLIPASE A2 |
Ama32850 | PATCHED-RELATED |
Ama32851 | PATCHED-RELATED |
Ama32852 | PATCHED-RELATED |
Ama32853 | PATCHED-RELATED |
Ama32854 | |
Ama32855 | PATCHED-RELATED |
Ama32856 | PATCHED-RELATED |
Ama32857 | |
Ama32858 | INHIBITOR OF APOPTOSIS |
Ama32859 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama32860 | PATCHED-RELATED |
Ama32861 | PATCHED-RELATED |
Ama32862 | PATCHED-RELATED |
Ama32863 | PATCHED-RELATED |
Ama32864 | PATCHED-RELATED |
Ama32865 | PATCHED-RELATED |
Ama32866 | PATCHED-RELATED |
Ama32867 | PATCHED-RELATED |
Ama32868 | PATCHED-RELATED |
Ama32869 | |
Ama32870 | PATCHED-RELATED |
Ama32871 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama32872 | |
Ama32873 |