The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33544 | ZINC FINGER PROTEIN 142 |
Ama33545 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama33546 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
Ama33547 | |
Ama33548 | |
Ama33550 | |
Ama33551 | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE |
Ama33552 | TETRATRICOPEPTIDE REPEAT PROTEIN 14 |
Ama33554 | UNCHARACTERIZED |
Ama33555 | |
Ama33556 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
Ama33557 | THAP DOMAIN PROTEIN |
Ama33558 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama33560 | |
Ama33561 | |
Ama33562 | |
Ama33564 | AGAP007547-PA |
Ama33565 | CYCLIN |
Ama33566 | PHOX (PX) DOMAIN-CONTAINING PROTEIN |
Ama33567 | |
Ama33568 | |
Ama33569 | |
Ama33570 | AP ENDONUCLEASE |
Ama33571 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
Ama33574 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
Ama33575 | |
Ama33576 | |
Ama33577 | INHIBITOR OF APOPTOSIS |
Ama33578 | |
Ama33579 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama33580 | PROTEIN CBG10425 |
Ama33581 | PROTEIN CBG10425 |
Ama33582 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33583 | PATCHED-RELATED |
Ama33584 | PATCHED-RELATED |
Ama33586 | |
Ama33588 | |
Ama33589 | |
Ama33590 | |
Ama33591 | |
Ama33592 | |
Ama33593 | |
Ama33594 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33595 | UNCHARACTERIZED |
Ama33599 | |
Ama335_5db7b01a | CGI-12 PROTEIN-RELATED |
Ama33600 | |
Ama33601 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama33604 | |
Ama33605 |