The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33606 | |
Ama33608 | |
Ama33609 | PROTEIN STAR |
Ama33610 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
Ama33611 | PUTATIVE-RELATED |
Ama33612 | |
Ama33613 | |
Ama33614 | |
Ama33616 | HEH2P |
Ama33617 | |
Ama33618 | HEH2P |
Ama33619 | |
Ama33622 | PR DOMAIN ZINC FINGER PROTEIN |
Ama33625 | LEUCINE CARBOXYL METHYLTRANSFERASE |
Ama33626 | ALPHA-MANNOSIDASE |
Ama33627 | HEH2P |
Ama33628 | LEUCINE CARBOXYL METHYLTRANSFERASE |
Ama33629 | ALPHA-MANNOSIDASE |
Ama33630 | HEH2P |
Ama33631 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33632 | INTIMAL THICKNESS RECEPTOR-RELATED |
Ama33635 | INTIMAL THICKNESS RECEPTOR-RELATED |
Ama33636 | RNA-BINDING MOTIF PROTEIN, X-LINKED 2 |
Ama33637 | SIMILAR TO CHROMOSOME 3 OPEN READING FRAME 20 |
Ama33638 | G-PROTEIN COUPLED RECEPTOR |
Ama33639 | COLLAGEN |
Ama33643 | |
Ama33644 | - |
Ama33645 | COLLAGEN ALPHA |
Ama33647 | COLLAGEN ALPHA |
Ama33648 | |
Ama33649 | DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED |
Ama33650 | DUF853 DOMAIN-CONTAINING PROTEIN |
Ama33651 | INTERMEMBRANE PHOSPHOLIPID TRANSPORT SYSTEM BINDING PROTEIN MLAD-RELATED |
Ama33652 | DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED |
Ama33653 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama33654 | RAS GTPASE-ACTIVATING PROTEINS |
Ama33656 | WD REPEAT-CONTAINING PROTEIN 73 |
Ama33657 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
Ama33658 | |
Ama33659 | |
Ama33660 | |
Ama33661 | |
Ama33662 | TREHALASE |
Ama33663 | WD40 REPEAT PROTEIN |
Ama33664 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
Ama33665 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
Ama33666 | - |
Ama33668 | |
Ama33669 |