The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33924 | PROTEIN CBG10425 |
Ama33925 | MOLTING PROTEIN MLT-4 |
Ama33926 | UNCHARACTERIZED HYPOTHALAMUS PROTEIN HT007 |
Ama33927 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
Ama33929 | |
Ama33933 | PROTEIN EIGER |
Ama33934 | PROTEIN EIGER |
Ama33935 | |
Ama33939 | MISSHAPEN LIKE KINASE 1 |
Ama33940 | |
Ama33942 | AGAP005574-PA |
Ama33943 | MOTILE SPERM DOMAIN-CONTAINING PROTEIN 1 |
Ama33944 | PUTATIVE-RELATED |
Ama33945 | |
Ama33946 | MOTILE SPERM DOMAIN-CONTAINING PROTEIN 1 |
Ama33947 | COP9 SIGNALOSOME COMPLEX SUBUNIT 9 |
Ama33948 | REVERSE TRANSCRIPTASES |
Ama33949 | |
Ama33950 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT |
Ama33952 | |
Ama33953 | RP42 RELATED |
Ama33954 | MONOCARBOXYLATE TRANSPORTER |
Ama33955 | LITHOSTATHINE |
Ama33959 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama33960 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama33961 | ACYL-COA THIOESTERASE |
Ama33962 | |
Ama33963 | RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F |
Ama33965 | |
Ama33966 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
Ama33969 | MYOSIN VII, XV |
Ama33970 | MYOSIN VII, XV |
Ama33972 | |
Ama33973 | |
Ama33974 | G-PROTEIN COUPLED RECEPTOR |
Ama33975 | ATP-DEPENDENT RNA HELICASE |
Ama33976 | |
Ama33977 | ATP-DEPENDENT RNA HELICASE |
Ama33978 | ATP-DEPENDENT RNA HELICASE |
Ama33979 | |
Ama33980 | - |
Ama33981 | |
Ama33983 | GLR0591 PROTEIN |
Ama33985 | UNCHARACTERIZED |
Ama33986 | GUANYLYL CYCLASE |
Ama33987 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33988 | PROTEIN ECT2 |
Ama33990 | OCTANOYLTRANSFERASE |
Ama33991 | TUBULIN |
Ama33992 | LIM DOMAIN-CONTAINING PROTEIN |