The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33993 | NUCLEOSIDE DIPHOSPHATE KINASE 7 |
Ama33994 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama33995 | ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 |
Ama33997 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
Ama33998 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama33999 | NF-KAPPA B ACTIVATING PROTEIN |
Ama339_5db7b01a | OVOCHYMASE-RELATED |
Ama33_5db7b01a | SH3 DOMAIN-CONTAINING |
Ama34000 | |
Ama34001 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
Ama34002 | |
Ama34005 | OS01G0750732 PROTEIN |
Ama34006 | ACETYLCHOLINESTERASE |
Ama34007 | |
Ama34013 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama34014 | |
Ama34015 | |
Ama34016 | PUTATIVE-RELATED |
Ama34017 | |
Ama34018 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34019 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama34020 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama34021 | KELCH PROTEIN |
Ama34023 | |
Ama34024 | JITTERBUG, ISOFORM N |
Ama34025 | TRANSPOSABLE ELEMENT-RELATED |
Ama34027 | |
Ama34028 | |
Ama34029 | SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJO |
Ama34031 | - |
Ama34032 | TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 |
Ama34033 | - |
Ama34034 | CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED |
Ama34035 | GLYCOGENIN SUBFAMILY MEMBER |
Ama34036 | |
Ama34037 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
Ama34039 | UNCHARACTERIZED |
Ama34041 | |
Ama34042 | |
Ama34043 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
Ama34044 | |
Ama34045 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
Ama34047 | DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN |
Ama34049 | GUANINE DEAMINASE |
Ama34051 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama34054 | |
Ama34055 | FERM DOMAIN CONTAINING PROTEIN |
Ama34056 | ALPHA-MANNOSIDASE |
Ama34057 | ALPHA-MANNOSIDASE |
Ama34059 |