The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama34060 | |
Ama34061 | |
Ama34063 | ATILLA, ISOFORM B-RELATED-RELATED |
Ama34065 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama34067 | |
Ama34068 | |
Ama34069 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 |
Ama34070 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 |
Ama34071 | ZINC FINGER PROTEIN |
Ama34072 | |
Ama34073 | |
Ama34074 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama34075 | |
Ama34077 | |
Ama34078 | |
Ama34079 | MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT |
Ama34083 | RIKEN CDNA D130052B06 GENE |
Ama34084 | MUSCLEBLIND-LIKE PROTEIN |
Ama34085 | MUSCLEBLIND-LIKE PROTEIN |
Ama34088 | PROTEIN MIS12 HOMOLOG |
Ama34089 | MONOCARBOXYLATE TRANSPORTER |
Ama34090 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 300 |
Ama34091 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama34092 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34093 | |
Ama34094 | |
Ama34095 | MOLTING PROTEIN MLT-4 |
Ama34096 | CARBONIC ANHYDRASE |
Ama34098 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Ama34099 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Ama340_5db7b01a | CARBOHYDRATE SULFOTRANSFERASE |
Ama34101 | |
Ama34102 | MARINER MOS1 TRANSPOSASE-LIKE PROTEIN |
Ama34104 | ANKYRIN REPEAT AND MYND DOMAIN PROTEIN 1 |
Ama34105 | ANKYRIN REPEAT AND MYND DOMAIN PROTEIN 1 |
Ama34106 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama34108 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama34110 | |
Ama34111 | RHO FAMILY GTPASE |
Ama34112 | |
Ama34113 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
Ama34114 | FAM124 DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34115 | FAM124 DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34116 | ANKYRIN REPEAT CONTAINING |
Ama34118 | |
Ama34119 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34120 | |
Ama34121 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama34124 | |
Ama34126 | AGAP006772-PA |